Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGACAGCCTGGCTGTC
..(((((((.((((((..(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016946
GeneSymbolF11R
Binding site2673,2692
Score0.904
Seed1
Au0.485
Energy-22.0
Binding len19
Me-6.2
Phylopstem-0.4820175142857143
Phylopflank0.03832721624999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure