Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTAATCCCAGCTGCT
..(((((((.(((((..((((&)))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016946
GeneSymbolF11R
Binding site1816,1835
Score0.846
Seed1
Au0.441
Energy-21.4
Binding len19
Me-6.433
Phylopstem-0.0960313585714286
Phylopflank0.12780499225000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure