Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCAGCTGCAAA
(((((((((((((((......&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016953
GeneSymbolPDE11A
Binding site3152,3168
Score1.0
Seed1
Au0.5
Energy-27.1
Binding len16
Me-4.171
Phylopstem0.7687516639999998
Phylopflank0.9565085572499998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure