Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTATATTGTTGTGATCATCATTTAGCTTAAGAAAGGCCAGA
..(((((..((((((((((((.&))))))))))))..........................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016955
GeneSymbolSEPSECS
Binding site3577,3621
Score0.923
Seed0
Au0.618
Energy-18.9
Binding len44
Me-8.327
Phylopstem0.22251018333333336
Phylopflank0.41203747250000006
Longest consecutive pairings12
Position of longest consecutive pairings32
Pairings in 3prime end7
Position3UTR
2D Structure