Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGCAACCAAAAGCTGCAGG
((((((((..(((((((.(((&))).)))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016955
GeneSymbolSEPSECS
Binding site386,409
Score0.846
Seed1
Au0.588
Energy-24.0
Binding len23
Me-6.236
Phylopstem-0.473677325
Phylopflank0.07976213874999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure