Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTACCTCTCGCAGCTGGAC
.(.(((((((((..((.(((.&)))))..).)))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017409
GeneSymbolHOXC10
Binding site325,345
Score0.808
Seed0
Au0.353
Energy-20.1
Binding len20
Me-7.497
Phylopstem3.834473
Phylopflank3.10332981
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure