Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTTACAGCTGATTAAGAAAAAATGTTTACATTTAATTCAGCTGTAT
.(((((((((((((((((((.&)))))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017412
GeneSymbolFZD3
Binding site7720,7767
Score0.846
Seed1
Au0.735
Energy-19.8
Binding len47
Me-3.793
Phylopstem0.6609820456521738
Phylopflank0.4373192924999999
Longest consecutive pairings11
Position of longest consecutive pairings36
Pairings in 3prime end7
Position3UTR
2D Structure