Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGTCACGGGCAGTTGCAGCCGCGGCCGAGCAGC
((((.(((((((((((((.((&.))..)))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017413
GeneSymbolAPLN
Binding site17,55
Score1.0
Seed0
Au0.279
Energy-25.8
Binding len26
Me-8.057
Phylopstem1.5853930769230768
Phylopflank0.7519643083333334
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
Position5UTR
2D Structure