Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCGCCAGCCGCGGCTCGCGC
.((((((((((((((......&.))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017413
GeneSymbolAPLN
Binding site228,250
Score1.0
Seed1
Au0.221
Energy-23.5
Binding len17
Me-4.026
Phylopstem0.38212385333333343
Phylopflank0.7761652925
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end2
Position5UTR
2D Structure