Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACAAAAGTACTTCAGCTGTG
..(((((((.((((((.((((&))))))).....))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017419
GeneSymbolASIC5
Binding site1078,1102
Score0.846
Seed1
Au0.618
Energy-17.5
Binding len24
Me-6.2
Phylopstem3.727623428571429
Phylopflank1.5044838287500002
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure