Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAATGGGAGCATTGGATTCTCTCCACTGCAGCTGCC
..(((((((((((.(..(((.&.)))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017420
GeneSymbolSIX4
Binding site1761,1800
Score1.0
Seed1
Au0.456
Energy-22.8
Binding len20
Me-6.047
Phylopstem0.6691787272727272
Phylopflank0.9435888749999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure