Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGATCCCTGCGGCTGCC
..((((((((((..((..((.&))..))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017422
GeneSymbolCALML5
Binding site24,43
Score0.923
Seed1
Au0.338
Energy-21.4
Binding len19
Me-7.103
Phylopstem-0.86901224
Phylopflank-0.1488263120454546
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure