Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATATTGGCCAGT
..(((((...((((((((....&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017425
GeneSymbolSPA17
Binding site3249,3263
Score0.923
Seed0
Au0.618
Energy-15.6
Binding len14
Me-9.57
Phylopstem-0.130573125
Phylopflank0.219320956875
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure