Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGATCGCACCACTGCAC
.(((((.(((((((....(((&)))..)))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017425
GeneSymbolSPA17
Binding site1138,1159
Score0.846
Seed0
Au0.397
Energy-18.3
Binding len21
Me-6.306
Phylopstem-0.26992232542857136
Phylopflank-0.16326435292500002
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure