Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTACAACTGCAGGTTCTGCAT
.(((((((((((((((.((((&))))))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017426
GeneSymbolNUP54
Binding site115,138
Score1.0
Seed1
Au0.515
Energy-23.2
Binding len23
Me-3.793
Phylopstem0.74608681
Phylopflank1.4563772655000005
Longest consecutive pairings14
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure