Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCGCATACATCCGGAGAATGAGCTGGGC
.(.(((((((((((((.....&)))))))))................)))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017429
GeneSymbolBCO1
Binding site1000,1032
Score0.846
Seed0
Au0.412
Energy-18.3
Binding len32
Me-5.351
Phylopstem4.019914193103449
Phylopflank3.6978058300000005
Longest consecutive pairings9
Position of longest consecutive pairings23
Pairings in 3prime end3
PositionCDS
2D Structure