Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCATGCAGCTGATCCCTCAGCAGCTGCT
..(((((((((((((((.(((&))).))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017432
GeneSymbolPTOV1
Binding site590,619
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len29
Me-4.957
Phylopstem2.460043433333333
Phylopflank2.8414920025000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure