Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGCTGCT
..(((((((((((((((..((&.)).))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017432
GeneSymbolPTOV1
Binding site1052,1105
Score0.846
Seed1
Au0.412
Energy-21.2
Binding len29
Me-4.957
Phylopstem1.081763325
Phylopflank0.5306892912500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure