Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAAACTTGCAGCAAATTGCAAA
((((((((((((((.((((((&)))))))))).)))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017435
GeneSymbolSLCO1C1
Binding site112,138
Score1.0
Seed1
Au0.603
Energy-21.1
Binding len26
Me-4.673
Phylopstem3.275711052631578
Phylopflank1.690909818
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end7
Position5UTR
2D Structure