Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTATATATCTATGCTAGT
..((((((((..(((((((((.&)))))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017437
GeneSymbolCPSF2
Binding site7694,7715
Score0.846
Seed1
Au0.706
Energy-17.3
Binding len21
Me-11.129
Phylopstem-0.2949123333333333
Phylopflank0.10592230400000002
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure