Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCTCATGCCTGTAGTCCCAGTTACTCAGGAGGCTGAGGCAGGA
....(((((((((((((((((&)))))..........................)))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_017437
GeneSymbolCPSF2
Binding site10859,10906
Score0.846
Seed0
Au0.456
Energy-23.3
Binding len47
Me-9.547
Phylopstem-0.09943410434782611
Phylopflank0.06636280624999999
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure