Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTAAGAATGGCAGCTGTT
..((((((((.(((.(.(((.&))).).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017437
GeneSymbolCPSF2
Binding site8498,8517
Score0.846
Seed1
Au0.618
Energy-19.8
Binding len19
Me-8.517
Phylopstem-0.25927503375000005
Phylopflank-0.09161997250000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure