Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGCCCGCCCACTGCAGC
((((((..((((.(.((((((&)))))).).))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017438
GeneSymbolSETD4
Binding site126,149
Score0.846
Seed0
Au0.338
Energy-21.5
Binding len23
Me-9.819
Phylopstem-0.34603133333333336
Phylopflank-0.3349390017500001
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end7
Position5UTR
2D Structure