Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGTCTATGGCAGCCGCAAGACGCTGTT
..((((((((((((((.....&.)))))))))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017442
GeneSymbolTLR9
Binding site2888,2920
Score0.923
Seed1
Au0.338
Energy-21.4
Binding len20
Me-4.957
Phylopstem1.0179082222222222
Phylopflank0.7461162175
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure