Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCGGTCCCTACGCAATAGCAGCTGCC
..((((((((.(((((.(((.&.)))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017453
GeneSymbolSTAU1
Binding site2326,2357
Score0.846
Seed1
Au0.353
Energy-23.7
Binding len21
Me-7.782
Phylopstem3.992081375
Phylopflank5.1634176125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure