Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTATTACATCCACCAGTGCAGCTGCAGA
(((((((((((((((((((((&))))..))))...)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017453
GeneSymbolSTAU1
Binding site554,584
Score0.846
Seed1
Au0.544
Energy-21.9
Binding len30
Me-3.938
Phylopstem1.9071198137931036
Phylopflank1.2324368199999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure