Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGGAACTGCAGCA
.....(((((((((.(..(((&)))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017456
GeneSymbolCYTH1
Binding site3244,3261
Score0.923
Seed0
Au0.538
Energy-19.4
Binding len17
Me-14.401
Phylopstem0.12922884444444446
Phylopflank0.5384596991666665
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure