Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGAGCCGCCGCAGCTGG
...((((((((((.((.....&.)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017457
GeneSymbolCYTH2
Binding site3359,3380
Score0.923
Seed0
Au0.397
Energy-22.5
Binding len15
Me-7.371
Phylopstem-0.08195753000000008
Phylopflank0.015169691250000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure