Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTAATCCCAGCTGCT
..(((((((.(((((..((((&)))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354486
GeneSymbolRC3H2
Binding site3048,3067
Score0.923
Seed1
Au0.382
Energy-21.1
Binding len19
Me-6.433
Phylopstem2.811918571428571
Phylopflank2.3148297125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure