Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTGGGAGCAGCTGGAAAATGCAATGGTAGCTGTT
..((((((((.((((((....&.)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354486
GeneSymbolRC3H2
Binding site1424,1460
Score1.0
Seed1
Au0.544
Energy-21.2
Binding len17
Me-7.782
Phylopstem0.934239925
Phylopflank-0.04041894250000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure