Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGAGATACAACCACAGCTGCC
..(((((((.(((((((....&.))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017481
GeneSymbolUBQLN3
Binding site1615,1637
Score0.877
Seed1
Au0.456
Energy-24.6
Binding len17
Me-6.2
Phylopstem3.57068
Phylopflank3.7584371150000004
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure