Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCAGCTGCAGCCTGAGGCTCACTTTCAGGTGCAGC
((((((((((((((((..((.&))..)))))))))))..................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017481
GeneSymbolUBQLN3
Binding site1939,1978
Score0.846
Seed1
Au0.382
Energy-22.6
Binding len39
Me-3.938
Phylopstem0.3037856558823529
Phylopflank1.7429463125
Longest consecutive pairings11
Position of longest consecutive pairings24
Pairings in 3prime end5
PositionCDS
2D Structure