Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGCGAACAGCTGCCAGAGCGAGCTGCAT
.(((((((((((((((.....&.)))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017490
GeneSymbolMARK2
Binding site2499,2528
Score0.846
Seed1
Au0.412
Energy-21.1
Binding len24
Me-3.793
Phylopstem3.9666916818181814
Phylopflank3.8752757545
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end3
PositionCDS
2D Structure