Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCAGCCGCAGCCGGCT
..((.((((((((((...(((&)))...))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017492
GeneSymbolATXN2L
Binding site2868,2889
Score0.846
Seed0
Au0.324
Energy-24.6
Binding len21
Me-9.309
Phylopstem3.2402892999999997
Phylopflank3.55798451
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure