Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCAGCCGCAGCACCCGCGGGCACCACTTTCGTGCAGT
(((((((((((((((..(((.&)))..))))))))))....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017495
GeneSymbolRBM38
Binding site827,868
Score0.846
Seed1
Au0.309
Energy-25.2
Binding len41
Me-4.171
Phylopstem1.4781637857142857
Phylopflank2.97053651
Longest consecutive pairings10
Position of longest consecutive pairings26
Pairings in 3prime end5
PositionCDS
2D Structure