Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATGGCAGCTGCT
..((((((((.(((((.....&))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017508
GeneSymbolSOX6
Binding site1139,1154
Score0.885
Seed1
Au0.485
Energy-23.9
Binding len15
Me-7.782
Phylopstem1.9229649375000002
Phylopflank3.0048392125000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure