Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGACGCAGCTGTAT
.((((((((((.......(((&)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017510
GeneSymbolTMED9
Binding site202,219
Score0.846
Seed1
Au0.412
Energy-19.4
Binding len17
Me-10.255
Phylopstem5.6198357
Phylopflank4.4909360212500005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure