Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCCCCAGGCGCGGCTGCC
..(((((((((.(((..((((&)))).....))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017514
GeneSymbolPLXNA3
Binding site148,171
Score0.846
Seed1
Au0.25
Energy-24.9
Binding len23
Me-8.537
Phylopstem-0.22687322222222223
Phylopflank0.20687192
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure