Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGAGCCTCCAGCTGTT
..(((((((.((((.(.((((&)))).).))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017515
GeneSymbolSLC35F2
Binding site2527,2548
Score0.846
Seed1
Au0.588
Energy-20.9
Binding len21
Me-6.935
Phylopstem2.816107142857143
Phylopflank4.320733832499998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure