Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCAGCCGCAGCCCCCGCAC
.(((.(((((((((((..(((&))).)))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017519
GeneSymbolARID1B
Binding site2356,2379
Score0.897
Seed0
Au0.338
Energy-24.5
Binding len23
Me-7.912
Phylopstem3.7705454545454544
Phylopflank3.492700000000001
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure