Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGTCGCCAGGA
.(((((((((((..((((....&))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017525
GeneSymbolCDC42BPG
Binding site1026,1043
Score0.923
Seed1
Au0.324
Energy-19.6
Binding len17
Me-5.939
Phylopstem-0.26153875
Phylopflank-0.265057965
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure