Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCATCGTGGCTGCGAA
(((((((((((((..(((((.&)))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017539
GeneSymbolDNAH3
Binding site9614,9635
Score1.0
Seed1
Au0.471
Energy-25.6
Binding len21
Me-5.53
Phylopstem3.3043554000000004
Phylopflank3.455901404999999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure