Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCACTGCTGCTGCTGCT
..(((((.(((((.((((((.&)))).)).))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017539
GeneSymbolDNAH3
Binding site1609,1629
Score0.846
Seed0
Au0.5
Energy-22.6
Binding len20
Me-8.127
Phylopstem5.497074428571429
Phylopflank4.09311294625
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure