Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAACGACCGCCTCAGCTCCTGCAGA
((((((((((((((((.((((&))))..))))))))...))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017541
GeneSymbolCRYGS
Binding site277,306
Score0.846
Seed1
Au0.397
Energy-22.4
Binding len29
Me-3.938
Phylopstem3.065692863636364
Phylopflank2.83085958125
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure