Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCGACTGTGCAGATTTCCACACATACCTAAGTCGCTGCAAC
((((((((((((((((((...&)))))))))))........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017541
GeneSymbolCRYGS
Binding site125,168
Score0.923
Seed1
Au0.485
Energy-18.9
Binding len43
Me-3.938
Phylopstem0.6940730523809524
Phylopflank0.3021589774999999
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure