Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGTGCTACACAAAATATGCCAGGA
.(((((((((...(((((....&.))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017542
GeneSymbolPOGK
Binding site3031,3060
Score0.923
Seed1
Au0.574
Energy-19.8
Binding len21
Me-11.254
Phylopstem0.8626667444444445
Phylopflank0.7625680112500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure