Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTAGCCACAGCTGTT
..(((((((.(((((.(((((&)))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017542
GeneSymbolPOGK
Binding site2897,2916
Score1.0
Seed1
Au0.426
Energy-21.1
Binding len19
Me-6.433
Phylopstem1.0494637714285715
Phylopflank0.4199380875
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure