Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAATGAAGCGAGCAGCTGCAAA
((((((((((.(((....(((&)))......)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354509
GeneSymbolUBE3A
Binding site1064,1089
Score0.923
Seed1
Au0.515
Energy-22.7
Binding len25
Me-7.731
Phylopstem0.007394980000000007
Phylopflank0.13583112249999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure