Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAACCAGCTCTACTGGATTCTTATCAGAAATCCTGCAT
.(((((..(((((((((((((&))))))))))).))........................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017548
GeneSymbolCDV3
Binding site1554,1598
Score0.923
Seed0
Au0.559
Energy-22.0
Binding len44
Me-7.651
Phylopstem3.553857785714286
Phylopflank3.0469862387499997
Longest consecutive pairings11
Position of longest consecutive pairings33
Pairings in 3prime end8
Position3UTR
2D Structure