Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAAGCCGGGGCTGCAGC
((((((((.(((((....(((&)))..))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017553
GeneSymbolINO80
Binding site4737,4757
Score0.846
Seed1
Au0.338
Energy-24.3
Binding len20
Me-5.962
Phylopstem3.21186975
Phylopflank4.0559742875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure